Piano Forum

Pages: [1] Go Down

Topic: Shall we not go on in so great a cause? (Read 1477 times)

dnephi

Sr. Member
Posts: 1859

Shall we not go on in so great a cause?

on: June 25, 2008, 05:28:12 PM

Behold a simulation of an AFM experiment with an ubiquitin on VMD.

How's the video quality?
Edit: Final Version

Logged

For us musicians, the music of Beethoven is the pillar of fire and cloud of mist which guided the Israelites through the desert. (Roughly quoted, Franz Liszt.)

Bob

PS Silver Member
Sr. Member
Posts: 16364

Re: Shall we not go on in so great a cause?

Reply #1 on: June 25, 2008, 08:15:51 PM

Ok. What is it?

At a glance it looks like a sea creature and some kind of Mars/male symbol/oddly colored ad for male enhancement, maybe anti-male enhancement with those colors.

Logged

Favorite new teacher quote -- "You found the only possible wrong answer."

pies

PS Silver Member
Sr. Member
Posts: 1467

Re: Shall we not go on in so great a cause?

Reply #2 on: June 25, 2008, 10:33:00 PM

Logged

Essyne

PS Silver Member
Sr. Member
Posts: 608

Re: Shall we not go on in so great a cause?

Reply #3 on: June 25, 2008, 11:43:05 PM

https://www.ks.uiuc.edu/Training/CaseStudies/pdfs/ubq.pdf

I did my research, and, I must say, it's quite fascinating, Mr. Baker.

Logged

"A bird does not sing because it has an answer. It sings because it has a song."
- Chinese Proverb -

dnephi

Sr. Member
Posts: 1859

Re: Shall we not go on in so great a cause?

Reply #4 on: June 25, 2008, 11:48:49 PM

Quote from: Essyne on June 25, 2008, 11:43:05 PM

https://www.ks.uiuc.edu/Training/CaseStudies/pdfs/ubq.pdf

I did my research, and, I must say, it's quite fascinating, Mr. Baker.

It's a protein that's being pulled on by a tiny invisible string, as it were.

If you want to do your own things, there are tutorials as well as the original file for your access on the https://www.ks.uuic.edu
More user friendly, and less flexible, perhaps, is UCSF's Chimera, easily found via google search.

Logged

For us musicians, the music of Beethoven is the pillar of fire and cloud of mist which guided the Israelites through the desert. (Roughly quoted, Franz Liszt.)

Essyne

PS Silver Member
Sr. Member
Posts: 608

Re: Shall we not go on in so great a cause?

Reply #5 on: June 25, 2008, 11:50:53 PM

Mmm.

Greatly appreciated.

Logged

"A bird does not sing because it has an answer. It sings because it has a song."
- Chinese Proverb -

Essyne

PS Silver Member
Sr. Member
Posts: 608

Re: Shall we not go on in so great a cause?

Reply #6 on: June 25, 2008, 11:54:35 PM

Oh dear. Now you have me wanting to learn all about all of this shtuff on the fore mentioned website.

I'm going to be here a while.

Logged

"A bird does not sing because it has an answer. It sings because it has a song."
- Chinese Proverb -

Essyne

PS Silver Member
Sr. Member
Posts: 608

Re: Shall we not go on in so great a cause?

Reply #7 on: June 26, 2008, 12:00:10 AM

https://www.ks.uiuc.edu/Publications/Papers/paper.cgi?tbcode=DITT2004

Obviously I need more background information. . .

Logged

"A bird does not sing because it has an answer. It sings because it has a song."
- Chinese Proverb -

dnephi

Sr. Member
Posts: 1859

Re: Shall we not go on in so great a cause?

Reply #8 on: June 26, 2008, 12:22:58 AM

Stick with this and these tutorials. Anything further is impertinent for the scope of your interest. I really don't see why this, of all of the 475+ lab publications was chosen for your attention

. https://www.ks.uiuc.edu/Research/vmd/ The work for those papers was done using the programs VMD and NAMD.

Logged

For us musicians, the music of Beethoven is the pillar of fire and cloud of mist which guided the Israelites through the desert. (Roughly quoted, Franz Liszt.)